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Seqera Cloud v26.1.0_cycle47

Feature updates and improvements

Studios

  • Added IGV viewer for genomic data visualization.
  • Added clipboard permissions to Studios iframe.
  • Added support for previewing multitrack IGV JSON files.
  • Improved Studios capabilities version check to normalize to major.minor granularity.

Compute environments

  • Added KMS encryption policy to AWS Cloud compute environments to support mounting KMS buckets in Studios.
  • Added boot disk image selection for Google Batch compute environments.
  • Added machine type selection for Google Batch compute environments.

Datasets

  • Added dataset link foundations.
  • Added validate and link endpoints for dataset linking.

Pipelines

  • Improved pipeline launch form to scroll to first invalid control and highlight invalid parameters step.

General

  • Updated tabs component styles.
  • Unified Seqera logos in compute environment and credential forms.

Bug fixes

Compute environments

  • Fixed Google Batch secrets support.

Data Explorer

  • Fixed horizontal scrolling in Data Explorer file preview modal.

Access control

  • Fixed and clarified refresh token properties.
  • Fixed permission required interceptor.
  • Fixed JWTAuthRequired interceptor binding to prevent silent bypass.

General

  • Fixed nginx absolute redirects.

Seqera Cloud v26.1.0_cycle46

Feature updates and improvements

Compute environments

  • Added human-readable messages for Google Batch exit codes.
  • Added network tags support for Google Batch compute environments.

Data Explorer

  • Updated S3-compatible storage label in Data Explorer filter.

Access control

  • Moved edit button to organization details card.
  • Improved welcome email UI.
  • Updated authentication error page background.

General

  • Added navigation side-nav component for in-page navigation.
  • Added expandable-text component to design system.

Bug fixes

Studios

  • Fixed Studios expiry check to include stopping Studios.

Pipelines

  • Fixed tower.launch.params.maxSize to be passed to the frontend and used in validators.
  • Fixed database migration by removing DEFAULT constraint on LONGTEXT column in tw_task_data_ext.

General

  • Fixed vertical alignment of checkboxes in table select column.
  • Fixed table checkbox positioning.

Seqera Cloud v26.1.0_cycle45

Feature updates and improvements

Compute environments

  • Added m8gn and m8gb instance families to NVMe list.

Datasets

  • Added initial support for datasets linking remote HTTP/HTTPS URLs.

Data Explorer

  • Added support for selecting data-link subfolders directly by subpath.
  • Added mountDataV2 API endpoint for mounting data-links with a specified path.

Access control

  • Updated OIDC authentication with PKCE and consent support.

Monitoring

  • Improved accessibility tags on progress bar percentage component.

General

  • Redesigned table component visuals.

Bug fixes

Studios

  • Fixed Studios analytics query to handle usage edge cases.

Compute environments

  • Fixed httpPutResponseHopLimit specification for AWS instances to allow Nextflow containers to authenticate with the metadata service.
  • Fixed 404 errors on legacy pod deletion during Kubernetes compute environment disposal.
  • Excluded Micronaut transitive dependencies from sched-pairing-client.

Pipelines

  • Fixed NXF_TML_FILE to use System.getenv in timeline configuration.

Access control

  • Fixed an intermittent login redirect bug.

Seqera Cloud v26.1.0_cycle44

Feature updates and improvements

Data Explorer

  • Added Molstar 3D viewer for PDB and CIF file preview.
  • Added Molstar PDB viewer component.

Compute environments

  • Added AWS credential modes (key-based access and role-based access).
  • Improved compute environment form warning display with individual stacked alerts.

Pipelines

  • Redesigned workflow notification email template.
  • Redesigned report preview modal header layout.
  • Improved clipboard UX in workflow details header.
  • Updated schema radio control copy.

Access control

  • Refined custom roles UI and added required description field.
  • Improved admin workspace list toolbar responsiveness.

General

  • Applied new status icons across Platform components.

Bug fixes

Studios

  • Removed and renamed outstanding references to rstudio.
  • Added backwards compatibility handling for persisted rstudio tool and icon fields.
  • Added workspace existence check before creating Studios workspace settings.
  • Removed Wave call for Studios version label.
  • Fixed R-IDE icon style.

Compute environments

  • Fixed compute environment error handling in forge delegates for createResources and disposeResources.

Pipelines

  • Fixed pipeline implicit default version.
  • Removed resourceLabelIds control from versionable controls tracking.

Monitoring

  • Fixed dashboard drop-down scrolling and character overflow.

Datasets

  • Fixed LazyInitializationException in avatar resolution during dataset creation.

General

  • Fixed side navigation width not updating in Safari when toggling collapse state.
  • Fixed credits banner showing during page load.

Seqera Cloud v26.1.0_cycle43

Feature updates and improvements

Compute environments

  • Added External ID support for IAM Role assumption.

Studios

  • Added default privacy setting to the Studio workspace settings form.
  • Implemented private Studio by default setting.
  • Added dedicated service for handling Studio data-link mappings.

Pipelines

  • Improved optimization profile modal workflow run select responsiveness.

Bug fixes

Studios

  • Fixed Studio quota limit check for Studios building created with autostart.

Seqera Cloud v26.1.0_cycle42

Feature updates and improvements

Pipelines

  • Showed wall time for running workflows with periodic updates.

Access control

  • Added visibility toggle button to secrets in Secrets table.
  • Added secrets list filtering by type.
  • Added ability to hide secret inline in Manage Secrets table.

Compute environments

  • Added warning when Azure Batch default VM image was upgraded from Ubuntu 20.04 to 24.04.
  • Updated default Azure Batch VM image from Ubuntu 20.04 to 24.04.

General

  • Added pipeline version tracking to Runs table.

Seqera Cloud v26.1.0_cycle41

Feature updates and improvements

Access control

  • Added Duplicate button to Roles page, allowing users to create new roles based on existing role permissions.

Pipelines

  • Refactored default pipeline version handling by removing ensureDefaultVersion support and improving version management logic.
  • Added new pipeline version update endpoint (POST /pipeline-versions/{versionId}) for updating specific pipeline versions independently from the default version.
  • Fixed PipelineVersionLaunchComposite query logic to properly return null for non-existent pipeline versions instead of creating invalid composite objects.

Compute environments

  • Updated default Azure Batch VM image to Ubuntu 24.04 (SKU 2404).

General

  • Added custom schema support to pipeline forms, allowing users to specify custom schema names or URLs for pipeline configuration.
  • Added centralized design system tokens (tokens.ts) with functional colors, semantic colors, and component sizes for consistent UI styling.
  • Added auto-detection of form controls in ExpansionPanelComponent via the new wtExpansionPanelDetail directive, reducing boilerplate code and enabling reactive updates to collapsed panel summaries.
  • Enabled custom pipeline schema retrieval via the /pipelines/{pipelineId}/schema endpoint, with improved error handling and refactored transaction management.

Seqera Cloud v26.1.0_cycle40

Feature updates and improvements

Compute environments

  • Allowed arbitrary Security Group/subnet values and improved error feedback.

Pipelines

  • Changed to only show current page number of workflows pagination.
  • Added template role selector to custom role form.
  • Added custom schema add edit launch pipeline.

Data Explorer

  • Implemented member details screen.
  • Removed participants on workspace deletion.
  • Improved error message when deleting custom roles.

General

  • Assigned pipeline.launch to the default version.

Bug fixes

User interface

  • Fixed incorrect icons displayed throughout the application.
  • Fixed Role View page paddings.
  • Fixed cost estimates to display with 2 decimal places for consistency.
  • Improved tasks table default pagination from 10 to 25 items.

Workflows and pipelines

  • Fixed pagination state loss when navigating back to workflow and task lists.
  • Fixed pipeline launch configuration being incorrectly reassigned when working with pipeline versions.
  • Fixed empty parameters being added after changing configuration profiles.

Studios

  • Fixed error handling when Studio version information is unavailable.

Access control

  • Fixed SSH key creation failing due to missing ID generator.

Seqera Cloud v26.1.0_cycle39

Feature updates and improvements

Access control and roles

  • Consolidated user and team management into an Access Control menu.

Pipeline and workflow management

  • Added operation to delete from workspace by userId.
  • Support keywords to search pipeline versions by name and hash.
  • Added username dynamic resource label placeholder for workflow labeling.

User interface

  • Added CE_FORMS_V2 compute environment form page.
  • Show only current page in task pagination.
  • Implement advanced search help popover in version list.

Bug fixes

Data Explorer

  • Fixed data links not displaying until all are fetched - now shows incremental loading.

Studios

  • Enable Fusion in Azure Batch with Ubuntu 24.04 by installing custom AppArmor profile.
  • Studio no longer throws error when failing to fetch Studio connect-client version label.

Seqera Cloud v26.1.0_cycle38

Feature updates and improvements

Studios

  • Added feature detection for one-time token support in Studios to determine whether to send deprecated long-lived tokens to the client.

Compute environments

  • Fixed compute environment listing failures for legacy Seqera Compute Batch configurations that don't implement IAwsCloudConfig.
  • Fixed compute environment listing when requesting attributes for deprecated platforms.
  • Fixed validation to enforce the default m5d.large instance type for Seqera Compute environments.

Pipelines

  • Implemented transparent hash version upgrade mechanism that automatically detects and upgrades outdated pipeline version hashes during comparison operations without persisting changes.
  • Implemented VersionedHash class to provide structured, type-safe access to version hash strings throughout the platform, improving code maintainability and enabling future hash algorithm upgrades.
  • Removed the pipeline_version_created audit event in favor of the existing pipeline_updated event, which already tracks pipeline version creation.

Permissions and roles

  • Added tristate checkboxes to category rows in the custom roles permissions table, allowing users to quickly select or deselect all permissions within a category.
  • Consolidated Members, Teams, and Collaborators pages into the Access Control page as tabs with pagination support for Teams list and empty-state components.
  • Added admin endpoint GET /api/admin/orgs/{orgId}/roles to list organization roles.
  • Added endpoint GET /orgs/{orgId}/users/{userId}/roles to list user roles in organization.
  • Added maxCustomRolesPerOrg quota definition and enforcement, limiting the number of custom roles per organization.

Data Explorer

  • Fixed file preview functionality for files containing special characters (brackets) in filenames by properly encoding and decoding file paths.

Bug fixes

  • Fixed Open in new tab functionality for workflow reports by implementing a separate route with report path passed as query parameter.
  • Fixed step status indication mechanism in launch forms to properly track all controls registered to a section, including those registered after initial creation.
  • Fixed Data Explorer path decoding to be null-safe, preventing test failures.
  • Fixed an issue causing custom pipeline info fetch error messages to be incorrectly removed when selecting the same value again in pipeline, revision, or main script fields.
  • Fixed an issue causing the Launchpad to display empty optimization buttons when optimization status is not set.
  • Prevent conda Studios from auto-starting when the organization exceeds Studio session limits.